Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939782.1_cds_XP_016484248.1_75280
CDS Infomation

[gene=LOC107804827] [db_xref=GeneID:107804827] [protein=laccase-15-like] [partial=5'] [protein_id=XP_016484248.1] [location=complement(join(20116..20246,20672..21634,21718..21846,22246..>22507))] [gbkey=CDS]
Sequence

TACGTAATAAAATGCAGGCATGGAGTAAAACAACCTAGGAATCCATGGTCAGATGGGCCA
GAATACATAACCCAATGTCCAATCCAACCAGGTTCAAAATTCAGGCAAATGTTGATCTTT
TCGGATGAGGAGGGCACCTTATGGTGGCATGCACACAAAGAATGGGATCGAGCCACGGTT
CATGGTGCCATTGTTGTTTATCCCAAACTTGGTACTACCTACCCTTTCCCCAGACCTGCT
GCCGAACTAACCGTTGTCTTAGGGGAGTGGTGGAAGGAAAATATTATGTTGGTATATGAG
CAATTTATCACCTCAGGAGGTCAACCAATTGATTCTGATGCTTATACAATAAATGGTCAG
CCTGGAGATTTTTACCCTTGCTCAAAGTATGAGACATTCAAGTTAGAGGTAGAGTGTGGG
AAGACATATCTGCTACGGATCATAAACGCCGCAATGAATGAAATGCTTTTCTTTGGAATA
GCAGAGCATAAACTCACAGTAGTAGGAACAGATGGAAGCTACACTAAGCCTTTGACAAGG
GATTTTATCACAATAACTCCTGGACAAACATTTGATTGCATATTGGAGGCTAACCAGAAG
CCGGGCCGTTACTATATGGCTGCTAGAGCTTATTCCAGTGGGGTTAATGTCAATTTTGAC
AACACAACCACCACAGCAATTGTGGAATACAAAGGAAACTACGACGAATATTCTTCTCCT
CCTCCATTGCCTTATTTACCTTGTTACAATGATACTCTTGCAGCTGTAGATTTTAGTGCT
AGTCTTAGAAGTTTGGCTTCGGATGACCACCCGATAACTGTACCAACTGAAGTGAAAGAT
AGGTTGATATCAACAGTTTCAATAAATGCATACCCTTGCCCTATAAACGGTACAAACTCT
ACGTGCCAAGGACCTAATGGAACGCGACTAGCAGCGAGTATGAACAACATAAGCTTTGTC
AACCCGTCCATTGATATCCTAGAAGCGTACTATTATCATATAAAGGGTGTGTTATTTGGG
GAGAAATTTCCAAAGTTTCCGCCATATGTATTCAATTATACTGCAGATGTCCTGCCTTTG
CGATTGGAAATACCAAAAAGCGGGACACATGTAGTAATGCTGAAGTATAATACGACAGTT
GAGCTCGTTTTTCAGGGGACTAACCTGGTTGCTGGCATAGATCATCCAATGCATCTACAT
GGATTTAATTTCTACACTGTTGGATTGGGACTTGGAAATTTCGACGAGAGGTTGGATCCT
CTGAACTATAATCTTGTCGATCCTCCTCGCCAGAACACTGTTGCTGTCCCTAAAAGGGGT
TGGGCTGCCATTAGATTCAAAGCAGACAACCCTGGAGTTTGGTTTTTGCACTGCCATTTT
GAGCGTCATTTGACATGGGGCATGAAGACTGTATTCATAGTTAGAGAAGGCGATTGCCCT
GAAGAAAAGTTGTTGCCACGTCCCTTAGACATGCCTCGATGCTGA

Peptide Sequence

PEP ID

XP_016484248.1
PEP Infomation

PREDICTED: laccase-15-like, partial [Nicotiana tabacum]
Sequence

YVIKCRHGVKQPRNPWSDGPEYITQCPIQPGSKFRQMLIFSDEEGTLWWHAHKEWDRATV
HGAIVVYPKLGTTYPFPRPAAELTVVLGEWWKENIMLVYEQFITSGGQPIDSDAYTINGQ
PGDFYPCSKYETFKLEVECGKTYLLRIINAAMNEMLFFGIAEHKLTVVGTDGSYTKPLTR
DFITITPGQTFDCILEANQKPGRYYMAARAYSSGVNVNFDNTTTTAIVEYKGNYDEYSSP
PPLPYLPCYNDTLAAVDFSASLRSLASDDHPITVPTEVKDRLISTVSINAYPCPINGTNS
TCQGPNGTRLAASMNNISFVNPSIDILEAYYYHIKGVLFGEKFPKFPPYVFNYTADVLPL
RLEIPKSGTHVVMLKYNTTVELVFQGTNLVAGIDHPMHLHGFNFYTVGLGLGNFDERLDP
LNYNLVDPPRQNTVAVPKRGWAAIRFKADNPGVWFLHCHFERHLTWGMKTVFIVREGDCP
EEKLLPRPLDMPRC

Transcript Sequence

Gene sequence data has not been registered.